Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015795654.1_cds_XP_016445256.1_3941
CDS Infomation

[gene=LOC107770458] [db_xref=GeneID:107770458] [protein=protein CROWDED NUCLEI 1-like] [protein_id=XP_016445256.1] [location=join(7147..7326,8330..8539,11429..11682,11829..12099,12172..12255,12734..14772,15034..15202,15529..15768)] [gbkey=CDS]
Sequence

ATGTCTACACCGCCGAGGAAATTTTGGACCGGCTGGTCGCTGTCACCGAGGAGCGAACCG
GCTGACAAGGGCAAAGGCGTTGCCTTTATGGGTACTGCTCAGAAAAGTTTGACGAGCCAA
GATTATGGAAACATGGATCAGGAAGCACTAATTGGAGAGGTCTCCAAGCTTGAAAATGAG
CTTTTTTCCTACCAATACAGTATGGGCCTTCTACTGATCGAAAAGAAGGATTGGTCTTCT
AAATTTGAAGAAATTAAGCAAGCCTTAGAAGAAGCAAATGGTGCTTATAGAAGAGAACAA
GCAGCTCATTCAATTGCTATATCTGAAGTGGAGAAACGGGAAGAGAATTTAAGGAAGGCA
CTGGGTGTCGAGAAGCAATGTGTGCTAGAGCTCGAGAAGGAATTGCGTGAGATGCGCTCG
GAGTATGCAGAGACTAAATATACAGCTGATTCAAAATTGGCAGAGGCAAATGCATTGGCT
GCTAGTGTTGAAGAGAAATCATTGGAGGTAGAAGCAAAGTTGCGTGCAGCGGATGCTAAG
CTTGCTGAGGTGAACCAAAAGAGTTCTGTAGTAGAGAGGAAACTTAATGAAGTTGAGGCT
CAAGAAAATGTGCTTCGAAGAGAACGGTCATCTTTCAATGCAGAGCGTGAAGCTTTTGGG
ACTTATCTATCCAGACAAAGAGAAGACTTGCAGGAATGGGAAAGAAAACTACAGGCTGGA
GAGGAGAGGTTGGCTGATGGCCGAAGATTGCTTAACCAAAGAGAGCAGCGAGCCAATGAC
ACTGATAGAATTTTGATGCAAAAGGAAAATGACCTTGAAGATGACCAGAGGAAAATTGAC
GCCGCTAACTCAGTTTTGAGGAAGAAAGAAGATGATATGAGCAGCCGGATAGCAAACCTT
ACTCATAAGGAGAAGGAACTCGAGGATGTGAGAAAGAGCCTGGAGATAAAAGAGAGGGAG
TTGCTCGATCTACAGGAAAAGTTGAACTTTAAAGAGAGAGAGGGAATTCAAAATCTAATG
GATGAACATCGAAGTATCCTGCATTCTAAGGAAGAAGAGTTTGAATTGGAACTGAGGCAA
AGGCGGGCATCACTTGATGAGGAACTAAAAGGTAAGGTGCTTGAACTGGAAACGAAGGAA
GCTGAAGTTGATCACATGGAAGAAAAGATTAAGAAACGAGAACAAGCCTTTGAAAAGAAG
CTGGAGAAAGTCAAGGAGAAGGAGAAGGATCATGAGTTGAAGTTAAAATCATTGAAGGAA
AGGGAGAAGTCTTTGAAAACCGAGGAGAAAATTTTGGAAACTGAAAGGAAACAGATAGTT
TCTGAGAAGGAGAATTTGCTAGCTCTGATGGCTGAGCTTGAGAATGTAAGAGCTGACATT
GAAAAGCAACAGGTCAAGATCAGTGACGAAACAGAACAACTTAAAGTAACTGAAGATGAG
AGGATGGAACATGCTCGCCTACAATCAGAACTGAAGCAGGAGATAGACAAGTGTAGACTC
CTCCAAGAAAATCTATTGAAGGAAGCTGAGGATTTGAAGCAGGAAAAAGAAAGATTTGAA
AAAGAATGGGAAGAACTGGATGAGAAAAGATCTGAGATCAAGATAGACTTGCAGGAACTT
AATGAACAGAGAAAGAATTTCGAAAAACTGAAACGCACTGAAGAGGAAATGATAAGCAAG
GAGAAGCTGGAAACAGAAAATTATGTTCAGAGGGAGTTGGAAGCCCTTAGAGTGGCAAGA
GAAACATTTGAAGCTACCATGGATCATGAGAAGTCAATATTAGCAGAACAAACTCGAAGT
GAAAAAAGCCAAATGCTTCATGCCTTTGAATGGCAAAAAAGAGAACTTGAAAGTGATATG
CTGAGGAAGCAGGAGGAAAAGGAGTCTGCACTGCATGTACGGGAGAAACTCTTTGAGGAA
GAGAGGCAGAGGGAGCTCAGCAATATTGAGTATTTAAAGGAAGTCGCCCATAGAGAAATG
GAAGAGATGAAATTAGAAAGAGTAAGTCTGGAGAAAGAAAAACAGGAAATTTCTGCTAAC
AAGGGGCTTCTTGAAGTACAACAGTTAGAGATGAAAAAGGATATTGATGTGCTTGTTGGC
TTAAGCAGGAAGTTGAAGGATCAGAGATTAGCTTTTATTGAGGAAAGGGACAAGTTTATT
GCTTTTGTCAAGCAGCAGAAAAGCTGCAGCTCATGCGGAGAAGGAATTCGTGTGATTGAG
TTTTCTGACCTTCAAGCTCTCGCTGAAGCGGAGAGTTTTGAGGCCCCTCCTCTGCCAAGT
GTCGTGCAGGAATATCTACACGATGGTCAAAGAGGATCTTTGGAAAGGACTGGTGATGAG
CTGCCCCCTGGTGCTCGTAATACAGGATCAATGGTTTCTGGTGGAACCATGTCCTGGCTT
CGGAAGTGCACATCTAAGATTCTCAAATTCTCACCTAGCAAAAAGATTGAAAATGCTTCT
TCTCATTGTCTGGTTGATGGATCTTCTGCATCAGAGAAGTGTGCAGACATATCACCAAAT
AAACTGTCAAACGAAGGAAATCACACGGATCTGGCTGTTTCCATGAATGTTCTTGATGAT
CAGAGGCTTCAACAGGGTGATGGCATTAGAGAGGTGGAAGTTGGCCAAGGCACTGTAGAA
GACTCTCATCATGCCAGCGTGAAAATTGGTCAGCTTAGACCTGTGAAGAAAGGGAGTGGT
AGAAGTAGTAAAACAGCAAAAGCTACAGATACAAGAACAGTTCTTGAAAAAGTTCCTAAA
GAGGGTGAGAATATGCACGCCAATGGAAGTTTGGAGACCTCAGTTAATATGAACGAGGAG
AGCCAGAGAAAATCAGGTCTCCTGGGTGGAGCACCAAGAAATTCCAGAAAACGTGGTCAC
ATGCAAACATCACAAGAAATGGCTAGTGAGATCGATGGCAATAATAGTGAAGGACAGTCA
GATAGTGTAGCCAACAGTCGCAGGAAGAGGAGACAACAGGTTGCCCCCGGTGTGCAGGCT
CATGCTGAAAGAAGATACAATCTCCGCCGACCTAAAAGTGCTGCACCAGCAACAGCCAAT
GGATCTTTGTCAGACCCAATTTCAAAATCTCAGGAAGAGAATTGGAACTCTAACGCTTCC
CTGGTGACTCCTCTGGTTGACAACGGTGCAGATGATGGAAAATATAGAAATTTTGCTGCT
GGTCATCCCACGGTAGCCGAGAGCCCTTTGAATGATACAGTAGACAACCAGCAAGGCAGT
GCTAACATAGCAACTGAACTGGTAGATGATACAGGTTTGAGTGAAGAGGTAAATGAAACA
CCAAAACAGCCTTCAGCTTATGATGTGAATGGAGATGGGGATGGGTGTGATGACAGTGAT
GGTGATGAGGGTGATGAGGAGGAAGAGATTGAACATCCCGGTGAAGTCTCTATAGGGAAG
AAGCTTTGGACTTTCATCACGACATAG

Peptide Sequence

PEP ID

XP_016445256.1
PEP Infomation

PREDICTED: protein CROWDED NUCLEI 1-like [Nicotiana tabacum]
Sequence

MSTPPRKFWTGWSLSPRSEPADKGKGVAFMGTAQKSLTSQDYGNMDQEALIGEVSKLENE
LFSYQYSMGLLLIEKKDWSSKFEEIKQALEEANGAYRREQAAHSIAISEVEKREENLRKA
LGVEKQCVLELEKELREMRSEYAETKYTADSKLAEANALAASVEEKSLEVEAKLRAADAK
LAEVNQKSSVVERKLNEVEAQENVLRRERSSFNAEREAFGTYLSRQREDLQEWERKLQAG
EERLADGRRLLNQREQRANDTDRILMQKENDLEDDQRKIDAANSVLRKKEDDMSSRIANL
THKEKELEDVRKSLEIKERELLDLQEKLNFKEREGIQNLMDEHRSILHSKEEEFELELRQ
RRASLDEELKGKVLELETKEAEVDHMEEKIKKREQAFEKKLEKVKEKEKDHELKLKSLKE
REKSLKTEEKILETERKQIVSEKENLLALMAELENVRADIEKQQVKISDETEQLKVTEDE
RMEHARLQSELKQEIDKCRLLQENLLKEAEDLKQEKERFEKEWEELDEKRSEIKIDLQEL
NEQRKNFEKLKRTEEEMISKEKLETENYVQRELEALRVARETFEATMDHEKSILAEQTRS
EKSQMLHAFEWQKRELESDMLRKQEEKESALHVREKLFEEERQRELSNIEYLKEVAHREM
EEMKLERVSLEKEKQEISANKGLLEVQQLEMKKDIDVLVGLSRKLKDQRLAFIEERDKFI
AFVKQQKSCSSCGEGIRVIEFSDLQALAEAESFEAPPLPSVVQEYLHDGQRGSLERTGDE
LPPGARNTGSMVSGGTMSWLRKCTSKILKFSPSKKIENASSHCLVDGSSASEKCADISPN
KLSNEGNHTDLAVSMNVLDDQRLQQGDGIREVEVGQGTVEDSHHASVKIGQLRPVKKGSG
RSSKTAKATDTRTVLEKVPKEGENMHANGSLETSVNMNEESQRKSGLLGGAPRNSRKRGH
MQTSQEMASEIDGNNSEGQSDSVANSRRKRRQQVAPGVQAHAERRYNLRRPKSAAPATAN
GSLSDPISKSQEENWNSNASLVTPLVDNGADDGKYRNFAAGHPTVAESPLNDTVDNQQGS
ANIATELVDDTGLSEEVNETPKQPSAYDVNGDGDGCDDSDGDEGDEEEEIEHPGEVSIGK
KLWTFITT

Transcript Sequence

Gene sequence data has not been registered.